Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe5G034400 [ Aqcoe5G034400] |
Chr_05 | 1868342 | 1873545 | v3.1 | Aquilegia coerulea (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe5G034400.1 Aqcoe5G034400.1 |
High | No | 2231 | OG0010282 | Get ORF Coding potential... Type: noncoding Potential: -0.783 Folding energies... MFEI: -25.495 AMFE: -0.673 GC content %: 37.875 | |
Acoerulea_Aqcoe5G034400.2 Aqcoe5G034400.2 |
High | No | 1669 | OG0010282 | Get ORF Coding potential... Type: noncoding Potential: -0.739 Folding energies... MFEI: -25.968 AMFE: -0.651 GC content %: 39.904 | |
Acoerulea_Aqcoe5G034400.3 Aqcoe5G034400.3 |
High | No | 1645 | OG0010282 | Get ORF Coding potential... Type: noncoding Potential: -0.736 Folding energies... MFEI: -26.103 AMFE: -0.656 GC content %: 39.818 | |
Acoerulea_Aqcoe5G034400.4 Aqcoe5G034400.4 |
High | No | 1497 | OG0010282 | Get ORF Coding potential... Type: noncoding Potential: -0.719 Folding energies... MFEI: -26.506 AMFE: -0.656 GC content %: 40.414 |