Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe5G270500 [ Aqcoe5G270500] |
Chr_05 | 20892444 | 20894788 | v3.1 | Aquilegia coerulea (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe5G270500.1 Aqcoe5G270500.1 |
High | No | 1070 | OG0007160 | Get ORF Coding potential... Type: noncoding Potential: -1.183 Folding energies... MFEI: -22.402 AMFE: -0.595 GC content %: 37.664 | |
Acoerulea_Aqcoe5G270500.2 Aqcoe5G270500.2 |
High | No | 1052 | OG0007160 | Get ORF Coding potential... Type: noncoding Potential: -1.181 Folding energies... MFEI: -22.567 AMFE: -0.598 GC content %: 37.738 | |
Acoerulea_Aqcoe5G270500.3 Aqcoe5G270500.3 |
High | No | 1029 | OG0007160 | Get ORF Coding potential... Type: noncoding Potential: -1.177 Folding energies... MFEI: -22.080 AMFE: -0.584 GC content %: 37.804 | |
Acoerulea_Aqcoe5G270500.4 Aqcoe5G270500.4 |
High | No | 1011 | OG0007160 | Get ORF Coding potential... Type: noncoding Potential: -1.175 Folding energies... MFEI: -22.245 AMFE: -0.587 GC content %: 37.883 | |
Acoerulea_Aqcoe5G270500.5 Aqcoe5G270500.5 |
High | No | 977 | OG0007160 | Get ORF Coding potential... Type: noncoding Potential: -1.169 Folding energies... MFEI: -23.439 AMFE: -0.647 GC content %: 36.233 |