Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe7G222600 [ Aqcoe7G222600] |
Chr_07 | 19325675 | 19329980 | v3.1 | Aquilegia coerulea (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe7G222600.1 Aqcoe7G222600.1 |
High | No | 1103 | OG0001605 | Get ORF Coding potential... Type: noncoding Potential: -0.720 Folding energies... MFEI: -29.166 AMFE: -0.721 GC content %: 40.435 | |
Acoerulea_Aqcoe7G222600.2 Aqcoe7G222600.2 |
High | No | 1327 | OG0001605 | Get ORF Coding potential... Type: noncoding Potential: -0.857 Folding energies... MFEI: -29.412 AMFE: -0.719 GC content %: 40.919 | |
Acoerulea_Aqcoe7G222600.3 Aqcoe7G222600.3 |
High | No | 1263 | OG0001605 | Get ORF Coding potential... Type: noncoding Potential: -0.847 Folding energies... MFEI: -29.327 AMFE: -0.715 GC content %: 41.013 | |
Acoerulea_Aqcoe7G222600.4 Aqcoe7G222600.4 |
High | No | 1322 | OG0001605 | Get ORF Coding potential... Type: noncoding Potential: -0.856 Folding energies... MFEI: -29.213 AMFE: -0.714 GC content %: 40.923 | |
Acoerulea_Aqcoe7G222600.5 Aqcoe7G222600.5 |
High | No | 1044 | OG0001605 | Get ORF Coding potential... Type: noncoding Potential: -0.707 Folding energies... MFEI: -29.358 AMFE: -0.725 GC content %: 40.517 | |
Acoerulea_Aqcoe7G222600.6 Aqcoe7G222600.6 |
High | No | 1041 | OG0001605 | Get ORF Coding potential... Type: noncoding Potential: -0.507 Folding energies... MFEI: -25.956 AMFE: -0.633 GC content %: 41.018 |