Ahalleri g03580

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Ahalleri_g03580
[ g03580]
FJVB01000005.1 2473833 2474298 v2.2 Arabidopsis halleri (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Ahalleri_g03580.t1
g03580.t1
High No 466 OG0087675
Coding potential...
Type: noncoding Potential: -0.928
Folding energies...
MFEI: -19.517 AMFE: -0.583
GC content
%: 33.476


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Ahalleri_g03580.png