Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ahalleri_g03730 [ g03730] |
FJVB01000006.1 | 201612 | 202978 | v2.2 | Arabidopsis halleri (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ahalleri_g03730.t1 g03730.t1 |
High | No | 461 | OG0016931 | Get ORF Coding potential... Type: noncoding Potential: -1.068 Folding energies... MFEI: -21.605 AMFE: -0.560 GC content %: 38.612 | |
Ahalleri_g03730.t2 g03730.t2 |
High | No | 639 | OG0016931 | Get ORF Coding potential... Type: noncoding Potential: -0.769 Folding energies... MFEI: -24.507 AMFE: -0.652 GC content %: 37.559 | |
Ahalleri_g03730.t3 g03730.t3 |
High | No | 620 | OG0016931 | Get ORF Coding potential... Type: noncoding Potential: -0.835 Folding energies... MFEI: -24.403 AMFE: -0.649 GC content %: 37.581 |