Ahalleri g04422

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Ahalleri_g04422
[ g04422]
FJVB01000007.1 1385480 1386174 v2.2 Arabidopsis halleri (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Ahalleri_g04422.t1
g04422.t1
High No 508 OG0087717
Coding potential...
Type: noncoding Potential: -0.495
Folding energies...
MFEI: -21.398 AMFE: -0.530
GC content
%: 40.354


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Ahalleri_g04422.png