Ahalleri g25825

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Ahalleri_g25825
[ g25825]
FJVB01000163.1 191898 192526 v2.2 Arabidopsis halleri (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Ahalleri_g25825.t1
g25825.t1
High No 629 OG0015729
Coding potential...
Type: noncoding Potential: -0.746
Folding energies...
MFEI: -20.302 AMFE: -0.487
GC content
%: 41.653


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Ahalleri_g25825.png