Ahypochondriacus AH012621

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Ahypochondriacus_AH012621
[ AH012621]
Scaffold_8 1875971 1876252 v2.1 Amaranthus hypocondriacus (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Ahypochondriacus_AH012621-RA
AH012621-RA
High No 282 OG0082907
Coding potential...
Type: noncoding Potential: -0.693
Folding energies...
MFEI: -30.071 AMFE: -0.633
GC content
%: 47.518


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Ahypochondriacus_AH012621.png