Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET0Gv20154200 [ AET0Gv20154200] |
jcf7190000162732 | 15017 | 21917 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET0Gv20154200.10 AET0Gv20154200.10 |
High | No | 1165 | OG0015788 | Get ORF Coding potential... Type: noncoding Potential: -1.242 Folding energies... MFEI: -28.678 AMFE: -0.679 GC content %: 42.232 | |
Atauschii_AET0Gv20154200.11 AET0Gv20154200.11 |
High | No | 927 | OG0015788 | Get ORF Coding potential... Type: noncoding Potential: -1.202 Folding energies... MFEI: -29.180 AMFE: -0.668 GC content %: 43.689 | |
Atauschii_AET0Gv20154200.16 AET0Gv20154200.16 |
High | No | 733 | OG0015788 | Get ORF Coding potential... Type: noncoding Potential: -0.959 Folding energies... MFEI: -28.363 AMFE: -0.664 GC content %: 42.701 |