Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET1Gv20084900 [ AET1Gv20084900] |
1D | 20750327 | 20756553 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET1Gv20084900.12 AET1Gv20084900.12 |
High | No | 642 | OG0015804 | Get ORF Coding potential... Type: noncoding Potential: -1.132 Folding energies... MFEI: -29.829 AMFE: -0.638 GC content %: 46.729 | |
Atauschii_AET1Gv20084900.2 AET1Gv20084900.2 |
High | No | 935 | OG0015804 | Get ORF Coding potential... Type: noncoding Potential: -1.209 Folding energies... MFEI: -30.834 AMFE: -0.670 GC content %: 45.989 | |
Atauschii_AET1Gv20084900.3 AET1Gv20084900.3 |
High | No | 948 | OG0015804 | Get ORF Coding potential... Type: noncoding Potential: -1.171 Folding energies... MFEI: -30.770 AMFE: -0.671 GC content %: 45.886 |