Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET1Gv20757300 [ AET1Gv20757300] |
1D | 419366702 | 419369232 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET1Gv20757300.1 AET1Gv20757300.1 |
High | No | 631 | OG0009754 | Get ORF Coding potential... Type: noncoding Potential: -0.927 Folding energies... MFEI: -26.735 AMFE: -0.620 GC content %: 43.106 | |
Atauschii_AET1Gv20757300.2 AET1Gv20757300.2 |
High | No | 595 | OG0069040 | Get ORF Coding potential... Type: noncoding Potential: -0.850 Folding energies... MFEI: -30.101 AMFE: -0.622 GC content %: 48.403 | |
Atauschii_AET1Gv20757300.3 AET1Gv20757300.3 |
High | No | 2522 | OG0009754 | Get ORF Coding potential... Type: noncoding Potential: -1.228 Folding energies... MFEI: -25.496 AMFE: -0.648 GC content %: 39.334 | |
Atauschii_AET1Gv20757300.4 AET1Gv20757300.4 |
High | No | 1650 | OG0009754 | Get ORF Coding potential... Type: noncoding Potential: -0.991 Folding energies... MFEI: -26.091 AMFE: -0.637 GC content %: 40.970 | |
Atauschii_AET1Gv20757300.5 AET1Gv20757300.5 |
High | No | 1887 | OG0009754 | Get ORF Coding potential... Type: noncoding Potential: -1.230 Folding energies... MFEI: -25.824 AMFE: -0.635 GC content %: 40.647 |