Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv20331800 [ AET2Gv20331800] |
2D | 112066074 | 112095704 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv20331800.1 AET2Gv20331800.1 |
High | No | 1216 | OG0024610 | Get ORF Coding potential... Type: noncoding Potential: -1.023 Folding energies... MFEI: -24.161 AMFE: -0.632 GC content %: 38.240 | |
Atauschii_AET2Gv20331800.10 AET2Gv20331800.10 |
High | No | 319 | OG0070120 | Get ORF Coding potential... Type: noncoding Potential: -1.144 Folding energies... MFEI: -18.339 AMFE: -0.504 GC content %: 36.364 | |
Atauschii_AET2Gv20331800.2 AET2Gv20331800.2 |
High | No | 772 | OG0024610 | Get ORF Coding potential... Type: noncoding Potential: -1.099 Folding energies... MFEI: -25.583 AMFE: -0.652 GC content %: 39.249 | |
Atauschii_AET2Gv20331800.8 AET2Gv20331800.8 |
High | No | 241 | OG0070121 | Get ORF Coding potential... Type: noncoding Potential: -1.084 Folding energies... MFEI: -17.884 AMFE: -0.507 GC content %: 35.270 |