Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv20547800 [ AET2Gv20547800] |
2D | 286053808 | 286058956 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv20547800.2 AET2Gv20547800.2 |
High | No | 765 | OG0016014 | Get ORF Coding potential... Type: noncoding Potential: -0.716 Folding energies... MFEI: -16.523 AMFE: -0.378 GC content %: 43.660 | |
Atauschii_AET2Gv20547800.5 AET2Gv20547800.5 |
High | No | 824 | OG0016014 | Get ORF Coding potential... Type: noncoding Potential: -0.373 Folding energies... MFEI: -15.228 AMFE: -0.347 GC content %: 43.932 | |
Atauschii_AET2Gv20547800.6 AET2Gv20547800.6 |
High | No | 410 | OG0070470 | Get ORF Coding potential... Type: noncoding Potential: -0.657 Folding energies... MFEI: -11.707 AMFE: -0.211 GC content %: 55.610 | |
Atauschii_AET2Gv20547800.7 AET2Gv20547800.7 |
High | No | 702 | OG0016014 | Get ORF Coding potential... Type: noncoding Potential: -0.726 Folding energies... MFEI: -16.481 AMFE: -0.390 GC content %: 42.308 |