Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv20693500 [ AET2Gv20693500] |
2D | 389403063 | 389408127 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv20693500.1 AET2Gv20693500.1 |
Low | No | 4092 | OG0024711 | Get ORF Coding potential... Type: noncoding Potential: -0.287 Folding energies... MFEI: -28.018 AMFE: -0.659 GC content %: 42.546 | |
Atauschii_AET2Gv20693500.2 AET2Gv20693500.2 |
High | No | 1893 | OG0024711 | Get ORF Coding potential... Type: noncoding Potential: -1.280 Folding energies... MFEI: -24.015 AMFE: -0.616 GC content %: 38.986 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Atauschii_AET2Gv20693500.1 | SwissProt | 2021-04-01 | Q8RY16 | 3.35e-27 |