Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv21190100 [ AET2Gv21190100] |
2D | 621093341 | 621223018 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv21190100.1 AET2Gv21190100.1 |
High | No | 297 | OG0071650 | Get ORF Coding potential... Type: noncoding Potential: -1.418 Folding energies... MFEI: -22.424 AMFE: -0.546 GC content %: 41.077 | |
Atauschii_AET2Gv21190100.17 AET2Gv21190100.17 |
High | No | 341 | OG0009857 | Get ORF Coding potential... Type: noncoding Potential: -1.427 Folding energies... MFEI: -26.217 AMFE: -0.592 GC content %: 44.282 | |
Atauschii_AET2Gv21190100.26 AET2Gv21190100.26 |
High | No | 275 | OG0071651 | Get ORF Coding potential... Type: noncoding Potential: -1.232 Folding energies... MFEI: -12.789 AMFE: -0.395 GC content %: 32.364 |