Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv21259900 [ AET2Gv21259900] |
2D | 639843086 | 639846080 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv21259900.1 AET2Gv21259900.1 |
High | No | 2424 | OG0000271 | Get ORF Coding potential... Type: noncoding Potential: -1.174 Folding energies... MFEI: -28.771 AMFE: -0.642 GC content %: 44.843 | |
Atauschii_AET2Gv21259900.2 AET2Gv21259900.2 |
High | No | 1435 | OG0000271 | Get ORF Coding potential... Type: noncoding Potential: -1.056 Folding energies... MFEI: -31.735 AMFE: -0.606 GC content %: 52.334 | |
Atauschii_AET2Gv21259900.3 AET2Gv21259900.3 |
High | No | 964 | OG0000271 | Get ORF Coding potential... Type: noncoding Potential: -1.064 Folding energies... MFEI: -28.807 AMFE: -0.546 GC content %: 52.801 | |
Atauschii_AET2Gv21259900.4 AET2Gv21259900.4 |
High | No | 1204 | OG0000271 | Get ORF Coding potential... Type: noncoding Potential: -1.191 Folding energies... MFEI: -41.711 AMFE: -0.646 GC content %: 64.618 |