Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET3Gv20350400 [ AET3Gv20350400] |
3D | 135536480 | 135543454 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET3Gv20350400.25 AET3Gv20350400.25 |
High | No | 1147 | OG0016173 | Get ORF Coding potential... Type: noncoding Potential: -0.662 Folding energies... MFEI: -28.003 AMFE: -0.618 GC content %: 45.336 | |
Atauschii_AET3Gv20350400.26 AET3Gv20350400.26 |
High | No | 1675 | OG0016173 | Get ORF Coding potential... Type: noncoding Potential: -0.766 Folding energies... MFEI: -27.051 AMFE: -0.627 GC content %: 43.164 | |
Atauschii_AET3Gv20350400.27 AET3Gv20350400.27 |
High | No | 501 | OG0016173 | Get ORF Coding potential... Type: noncoding Potential: -0.899 Folding energies... MFEI: -22.834 AMFE: -0.599 GC content %: 38.124 |