Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET3Gv20625400 [ AET3Gv20625400] |
3D | 367525296 | 367533035 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET3Gv20625400.10 AET3Gv20625400.10 |
High | No | 405 | OG0025039 | Get ORF Coding potential... Type: noncoding Potential: -0.441 Folding energies... MFEI: -30.321 AMFE: -0.582 GC content %: 52.099 | |
Atauschii_AET3Gv20625400.12 AET3Gv20625400.12 |
High | No | 346 | OG0072970 | Get ORF Coding potential... Type: noncoding Potential: -0.558 Folding energies... MFEI: -28.526 AMFE: -0.595 GC content %: 47.977 | |
Atauschii_AET3Gv20625400.3 AET3Gv20625400.3 |
High | No | 608 | OG0025040 | Get ORF Coding potential... Type: noncoding Potential: -1.338 Folding energies... MFEI: -28.339 AMFE: -0.629 GC content %: 45.066 | |
Atauschii_AET3Gv20625400.4 AET3Gv20625400.4 |
High | No | 711 | OG0025040 | Get ORF Coding potential... Type: noncoding Potential: -1.180 Folding energies... MFEI: -27.890 AMFE: -0.630 GC content %: 44.304 | |
Atauschii_AET3Gv20625400.8 AET3Gv20625400.8 |
High | No | 220 | OG0025039 | Get ORF Coding potential... Type: noncoding Potential: -1.447 Folding energies... MFEI: -23.136 AMFE: -0.428 GC content %: 54.091 |