Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET3Gv20704500 [ AET3Gv20704500] |
3D | 419895427 | 419896900 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET3Gv20704500.1 AET3Gv20704500.1 |
High | No | 1247 | OG0073161 | Get ORF Coding potential... Type: noncoding Potential: -0.971 Folding energies... MFEI: -33.416 AMFE: -0.658 GC content %: 50.762 | |
Atauschii_AET3Gv20704500.2 AET3Gv20704500.2 |
High | No | 949 | OG0004718 | Get ORF Coding potential... Type: noncoding Potential: -0.647 Folding energies... MFEI: -35.290 AMFE: -0.666 GC content %: 53.003 | |
Atauschii_AET3Gv20704500.4 AET3Gv20704500.4 |
High | No | 533 | OG0004718 | Get ORF Coding potential... Type: noncoding Potential: -1.098 Folding energies... MFEI: -28.630 AMFE: -0.623 GC content %: 45.966 | |
Atauschii_AET3Gv20704500.5 AET3Gv20704500.5 |
High | No | 821 | OG0004718 | Get ORF Coding potential... Type: noncoding Potential: -0.765 Folding energies... MFEI: -36.139 AMFE: -0.664 GC content %: 54.446 |