Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET5Gv20925500 [ AET5Gv20925500] |
5D | 483550996 | 483552969 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET5Gv20925500.1 AET5Gv20925500.1 |
High | No | 802 | OG0007014 | Get ORF Coding potential... Type: noncoding Potential: -0.578 Folding energies... MFEI: -39.526 AMFE: -0.639 GC content %: 61.845 | |
Atauschii_AET5Gv20925500.2 AET5Gv20925500.2 |
High | No | 810 | OG0007014 | Get ORF Coding potential... Type: noncoding Potential: -0.868 Folding energies... MFEI: -37.630 AMFE: -0.654 GC content %: 57.531 | |
Atauschii_AET5Gv20925500.3 AET5Gv20925500.3 |
High | No | 310 | OG0007014 | Get ORF Coding potential... Type: noncoding Potential: -0.926 Folding energies... MFEI: -32.613 AMFE: -0.571 GC content %: 57.097 | |
Atauschii_AET5Gv20925500.4 AET5Gv20925500.4 |
High | No | 592 | OG0007014 | Get ORF Coding potential... Type: noncoding Potential: -0.950 Folding energies... MFEI: -34.780 AMFE: -0.626 GC content %: 55.574 |