Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET5Gv21156800 [ AET5Gv21156800] |
5D | 552442109 | 552447603 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET5Gv21156800.17 AET5Gv21156800.17 |
High | No | 285 | OG0077833 | Get ORF Coding potential... Type: noncoding Potential: -0.631 Folding energies... MFEI: -25.053 AMFE: -0.600 GC content %: 41.754 | |
Atauschii_AET5Gv21156800.20 AET5Gv21156800.20 |
High | No | 278 | OG0077834 | Get ORF Coding potential... Type: noncoding Potential: -1.080 Folding energies... MFEI: -40.252 AMFE: -0.658 GC content %: 61.151 | |
Atauschii_AET5Gv21156800.21 AET5Gv21156800.21 |
High | No | 502 | OG0077835 | Get ORF Coding potential... Type: noncoding Potential: -1.040 Folding energies... MFEI: -43.685 AMFE: -0.741 GC content %: 58.964 | |
Atauschii_AET5Gv21156800.3 AET5Gv21156800.3 |
High | No | 752 | OG0077836 | Get ORF Coding potential... Type: noncoding Potential: -0.605 Folding energies... MFEI: -31.609 AMFE: -0.600 GC content %: 52.660 |