Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET6Gv20048800 [ AET6Gv20048800] |
6D | 9149142 | 9151455 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET6Gv20048800.1 AET6Gv20048800.1 |
High | No | 211 | OG0078057 | Get ORF Coding potential... Type: noncoding Potential: -1.191 Folding energies... MFEI: -38.578 AMFE: -0.509 GC content %: 75.829 | |
Atauschii_AET6Gv20048800.3 AET6Gv20048800.3 |
High | No | 333 | OG0002943 | Get ORF Coding potential... Type: noncoding Potential: -0.211 Folding energies... MFEI: -50.270 AMFE: -0.718 GC content %: 69.970 | |
Atauschii_AET6Gv20048800.4 AET6Gv20048800.4 |
High | No | 754 | OG0025800 | Get ORF Coding potential... Type: noncoding Potential: -0.914 Folding energies... MFEI: -33.156 AMFE: -0.663 GC content %: 50.000 | |
Atauschii_AET6Gv20048800.5 AET6Gv20048800.5 |
High | No | 746 | OG0025800 | Get ORF Coding potential... Type: noncoding Potential: -0.942 Folding energies... MFEI: -33.472 AMFE: -0.669 GC content %: 50.000 |