Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET6Gv20609800 [ AET6Gv20609800] |
6D | 327352315 | 327372028 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET6Gv20609800.21 AET6Gv20609800.21 |
High | No | 371 | OG0078985 | Get ORF Coding potential... Type: noncoding Potential: -0.545 Folding energies... MFEI: -23.423 AMFE: -0.550 GC content %: 42.588 | |
Atauschii_AET6Gv20609800.24 AET6Gv20609800.24 |
High | No | 207 | OG0078986 | Get ORF Coding potential... Type: noncoding Potential: -0.940 Folding energies... MFEI: -20.676 AMFE: -0.510 GC content %: 40.580 | |
Atauschii_AET6Gv20609800.25 AET6Gv20609800.25 |
High | No | 404 | OG0078987 | Get ORF Coding potential... Type: noncoding Potential: -1.033 Folding energies... MFEI: -33.045 AMFE: -0.642 GC content %: 51.485 |