Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET6Gv20717700 [ AET6Gv20717700] |
6D | 397724463 | 397728937 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET6Gv20717700.39 AET6Gv20717700.39 |
High | No | 656 | OG0016660 | Get ORF Coding potential... Type: noncoding Potential: -0.937 Folding energies... MFEI: -26.799 AMFE: -0.615 GC content %: 43.598 | |
Atauschii_AET6Gv20717700.40 AET6Gv20717700.40 |
High | No | 1376 | OG0016661 | Get ORF Coding potential... Type: noncoding Potential: -0.999 Folding energies... MFEI: -27.725 AMFE: -0.644 GC content %: 43.023 | |
Atauschii_AET6Gv20717700.41 AET6Gv20717700.41 |
High | No | 558 | OG0016661 | Get ORF Coding potential... Type: noncoding Potential: -0.755 Folding energies... MFEI: -26.183 AMFE: -0.549 GC content %: 47.670 | |
Atauschii_AET6Gv20717700.42 AET6Gv20717700.42 |
High | No | 464 | OG0016661 | Get ORF Coding potential... Type: noncoding Potential: -0.822 Folding energies... MFEI: -28.922 AMFE: -0.564 GC content %: 51.293 |