GreeNC

Gene information

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name	Chrom.	Start	End	Assembly	Species	Details
Atauschii_AET7Gv20763900 [ AET7Gv20763900]	7D	381247574	381252765	v4	Aegilops tauschii (Ensembl Plants 51)	Coding? Yes

Transcript features

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name	Confidence	Pre-miRNA	Length	Orthologous group	Sequence	Details
Atauschii_AET7Gv20763900.11 AET7Gv20763900.11	High	No	863	OG0007108		Get ORF Coding potential... Type: noncoding Potential: -1.008 Folding energies... MFEI: -30.637 AMFE: -0.645 GC content %: 47.509
Atauschii_AET7Gv20763900.5 AET7Gv20763900.5	High	No	805	OG0007108		Get ORF Coding potential... Type: noncoding Potential: -0.996 Folding energies... MFEI: -31.863 AMFE: -0.644 GC content %: 49.441
Atauschii_AET7Gv20763900.6 AET7Gv20763900.6	High	No	813	OG0007108		Get ORF Coding potential... Type: noncoding Potential: -0.998 Folding energies... MFEI: -31.771 AMFE: -0.638 GC content %: 49.815
Atauschii_AET7Gv20763900.7 AET7Gv20763900.7	High	No	805	OG0007108		Get ORF Coding potential... Type: noncoding Potential: -0.996 Folding energies... MFEI: -31.901 AMFE: -0.642 GC content %: 49.689
Atauschii_AET7Gv20763900.8 AET7Gv20763900.8	High	No	781	OG0007108		Get ORF Coding potential... Type: noncoding Potential: -0.990 Folding energies... MFEI: -31.652 AMFE: -0.634 GC content %: 49.936

Gene models

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).