Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET7Gv20984500 [ AET7Gv20984500] |
7D | 515773749 | 515786685 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET7Gv20984500.1 AET7Gv20984500.1 |
High | No | 753 | OG0081283 | Get ORF Coding potential... Type: noncoding Potential: -1.080 Folding energies... MFEI: -32.656 AMFE: -0.623 GC content %: 52.457 | |
Atauschii_AET7Gv20984500.22 AET7Gv20984500.22 |
High | No | 964 | OG0026327 | Get ORF Coding potential... Type: noncoding Potential: -1.040 Folding energies... MFEI: -32.407 AMFE: -0.690 GC content %: 46.992 | |
Atauschii_AET7Gv20984500.23 AET7Gv20984500.23 |
High | No | 2578 | OG0026327 | Get ORF Coding potential... Type: noncoding Potential: -1.265 Folding energies... MFEI: -28.751 AMFE: -0.705 GC content %: 40.807 |