Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET7Gv21046800 [ AET7Gv21046800] |
7D | 545880354 | 545883172 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET7Gv21046800.1 AET7Gv21046800.1 |
High | No | 802 | OG0000891 | Get ORF Coding potential... Type: noncoding Potential: -1.273 Folding energies... MFEI: -30.349 AMFE: -0.671 GC content %: 45.262 | |
Atauschii_AET7Gv21046800.2 AET7Gv21046800.2 |
High | No | 560 | OG0000891 | Get ORF Coding potential... Type: noncoding Potential: -1.098 Folding energies... MFEI: -31.393 AMFE: -0.649 GC content %: 48.393 | |
Atauschii_AET7Gv21046800.3 AET7Gv21046800.3 |
High | No | 816 | OG0000891 | Get ORF Coding potential... Type: noncoding Potential: -1.203 Folding energies... MFEI: -36.164 AMFE: -0.657 GC content %: 55.025 | |
Atauschii_AET7Gv21046800.4 AET7Gv21046800.4 |
High | No | 437 | OG0000891 | Get ORF Coding potential... Type: noncoding Potential: -1.372 Folding energies... MFEI: -28.581 AMFE: -0.586 GC content %: 48.741 |