Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Athaliana_AT1G10657 AT1G10657 |
Chr1 | 3530353 | 3532017 | v11 | Arabidopsis thaliana (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Athaliana_AT1G10657.2 AT1G10657.2 |
High | No | 1081 | OG0003634 | Get ORF Coding potential... Type: noncoding Potential: -1.086 Folding energies... MFEI: -24.477 AMFE: -0.672 GC content %: 36.448 | |
Athaliana_AT1G10657.3 AT1G10657.3 |
High | No | 1217 | OG0003634 | Get ORF Coding potential... Type: noncoding Potential: -1.096 Folding energies... MFEI: -24.133 AMFE: -0.677 GC content %: 35.661 |