Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Athaliana_AT1G66820 AT1G66820 |
Chr1 | 24929887 | 24930627 | v11 | Arabidopsis thaliana (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Athaliana_AT1G66820.1 AT1G66820.1 |
Low | No | 741 | OG0009657 | Get ORF Coding potential... Type: noncoding Potential: -0.838 Folding energies... MFEI: -24.831 AMFE: -0.643 GC content %: 38.596 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT1G66820.1 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |