Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Athaliana_AT2G05185 AT2G05185 |
Chr2 | 1876899 | 1878322 | v11 | Arabidopsis thaliana (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Athaliana_AT2G05185.1 AT2G05185.1 |
High | No | 826 | OG0015722 | Get ORF Coding potential... Type: noncoding Potential: -0.979 Folding energies... MFEI: -21.356 AMFE: -0.573 GC content %: 37.288 | |
Athaliana_AT2G05185.2 AT2G05185.2 |
High | No | 686 | OG0024015 | Get ORF Coding potential... Type: noncoding Potential: -0.948 Folding energies... MFEI: -21.443 AMFE: -0.577 GC content %: 37.172 |