Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Athaliana_AT4G33865 AT4G33865 |
Chr4 | 16233045 | 16234273 | v11 | Arabidopsis thaliana (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Athaliana_AT4G33865.1 AT4G33865.1 |
Low | No | 680 | OG0066278 | Get ORF Coding potential... Type: noncoding Potential: -0.071 Folding energies... MFEI: -22.721 AMFE: -0.606 GC content %: 37.500 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT4G33865.1 | SwissProt | 2021-04-01 | Q680P8 | 3.29e-33 |
Athaliana_AT4G33865.1 | RepBase (RepeatMasker) | 2014-01-31 | LINE/Penelope |