Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bnapus_GSBRNA2T00009699001 [ GSBRNA2T00009699001] |
LK032101 | 509230 | 510180 | v1 | Brassica napus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bnapus_CDY19910 CDY19910 |
Low | No | 844 | OG0002317 | Get ORF Coding potential... Type: noncoding Potential: -0.990 Folding energies... MFEI: -25.391 AMFE: -0.605 GC content %: 41.943 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bnapus_CDY19910 | SwissProt | 2021-04-01 | C0Q9V5 | 1.06e-7 |
Bnapus_CDY19910 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |