Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bnapus_GSBRNA2T00110549001 [ GSBRNA2T00110549001] |
LK031921 | 356797 | 359720 | v1 | Brassica napus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bnapus_CDY00705 CDY00705 |
Low | No | 2924 | OG0111985 | Get ORF Coding potential... Type: noncoding Potential: -0.130 Folding energies... MFEI: -20.530 AMFE: -0.587 GC content %: 34.986 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bnapus_CDY00705 | SwissProt | 2021-04-01 | Q9FK25 | 4.6e-18 |
Bnapus_CDY00705 | RepBase (RepeatMasker) | 2014-01-31 | DNA/hAT-Tag1 |