Bvulgaris BVRB 001950

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Bvulgaris_BVRB_001950
[ BVRB_001950]
0056.scaffold00205 692500 702072 v1.2 Beta vulgaris (Phytozome 13)
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Bvulgaris_KMS96126
KMS96126
High No 485 OG0102698
Coding potential...
Type: noncoding Potential: -0.863
Folding energies...
MFEI: -22.062 AMFE: -0.645
GC content
%: 34.227


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Bvulgaris_BVRB_001950.png