Bvulgaris BVRB 002020

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Bvulgaris_BVRB_002020
[ BVRB_002020]
0069.scaffold00241 156445 157111 v1.2 Beta vulgaris (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Bvulgaris_KMS96090
KMS96090
High No 667 OG0102694
Coding potential...
Type: noncoding Potential: -1.462
Folding energies...
MFEI: -22.114 AMFE: -0.521
GC content
%: 42.429


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Bvulgaris_BVRB_002020.png