Bvulgaris BVRB 1g002790

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Bvulgaris_BVRB_1g002790
[ BVRB_1g002790]
1 3090828 3092218 v1.2 Beta vulgaris (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Bvulgaris_KMT20275
KMT20275
High No 1209 OG0105872
Coding potential...
Type: noncoding Potential: -1.021
Folding energies...
MFEI: -18.644 AMFE: -0.511
GC content
%: 36.476


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Bvulgaris_BVRB_1g002790.png