Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bvulgaris_BVRB_1g019500 [ BVRB_1g019500] |
Bvchr1_un.sca002 | 3499657 | 3500622 | v1.2 | Beta vulgaris (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bvulgaris_KMT00128 KMT00128 |
Low | No | 966 | OG0103285 | Get ORF Coding potential... Type: noncoding Potential: -1.365 Folding energies... MFEI: -18.261 AMFE: -0.486 GC content %: 37.578 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bvulgaris_KMT00128 | RepBase (RepeatMasker) | 2014-01-31 | LTR/ERV1 |