Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bvulgaris_BVRB_2g035640 [ BVRB_2g035640] |
2 | 16768287 | 16769676 | v1.2 | Beta vulgaris (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bvulgaris_KMT17614 KMT17614 |
Low | No | 1390 | OG0105533 | Get ORF Coding potential... Type: noncoding Potential: -0.548 Folding energies... MFEI: -19.122 AMFE: -0.561 GC content %: 34.101 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bvulgaris_KMT17614 | SwissProt | 2021-04-01 | Q85FY6 | 1.45e-11 |
Bvulgaris_KMT17614 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Pao |