Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bvulgaris_BVRB_2g044630 [ BVRB_2g044630] |
Bvchr2_un.sca001 | 202744 | 206541 | v1.2 | Beta vulgaris (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bvulgaris_KMS99464 KMS99464 |
Low | No | 3798 | OG0103200 | Get ORF Coding potential... Type: coding Potential: 0.225 Folding energies... MFEI: -24.534 AMFE: -0.656 GC content %: 37.388 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bvulgaris_KMS99464 | RepBase (RepeatMasker) | 2014-01-31 | LINE/L2; LTR/Gypsy |