Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bvulgaris_BVRB_5g108000 [ BVRB_5g108000] |
5 | 18365272 | 18366303 | v1.2 | Beta vulgaris (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bvulgaris_KMT11474 KMT11474 |
High | No | 896 | OG0027870 | Get ORF Coding potential... Type: noncoding Potential: -1.314 Folding energies... MFEI: -22.712 AMFE: -0.628 GC content %: 36.161 | |
Bvulgaris_KMT11475 KMT11475 |
High | No | 297 | OG0027870 | Get ORF Coding potential... Type: noncoding Potential: -0.807 Folding energies... MFEI: -27.980 AMFE: -0.594 GC content %: 47.138 |