Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bvulgaris_BVRB_5g109540 [ BVRB_5g109540] |
5 | 22957111 | 22957864 | v1.2 | Beta vulgaris (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bvulgaris_KMT11640 KMT11640 |
Low | No | 754 | OG0104805 | Get ORF Coding potential... Type: noncoding Potential: -0.732 Folding energies... MFEI: -20.477 AMFE: -0.564 GC content %: 36.340 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bvulgaris_KMT11640 | RepBase (RepeatMasker) | 2014-01-31 | LINE/L1 |