Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bvulgaris_BVRB_5g113640 [ BVRB_5g113640] |
5 | 40517725 | 40519709 | v1.2 | Beta vulgaris (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bvulgaris_KMT10866 KMT10866 |
Low | No | 1985 | OG0104688 | Get ORF Coding potential... Type: noncoding Potential: -0.594 Folding energies... MFEI: -22.922 AMFE: -0.722 GC content %: 31.738 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bvulgaris_KMT10866 | RepBase (RepeatMasker) | 2014-01-31 | DNA/CMC-EnSpm |