Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bvulgaris_BVRB_8g201260 [ BVRB_8g201260] |
Bvchr8_un.sca007 | 483393 | 486937 | v1.2 | Beta vulgaris (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bvulgaris_KMS96630 KMS96630 |
Low | No | 3445 | OG0027797 | Get ORF Coding potential... Type: noncoding Potential: -1.100 Folding energies... MFEI: -22.766 AMFE: -0.683 GC content %: 33.324 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bvulgaris_KMS96630 | SwissProt | 2021-04-01 | C8KI33 | 2.14e-4 |
Bvulgaris_KMS96630 | RepBase (RepeatMasker) | 2014-01-31 | tRNA |