Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Carietinum_Ca_23128 [ Ca_23128] |
scaffold562 | 102928 | 103170 | v1 | Cicer arietinum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Carietinum_Ca_23128 Ca_23128 |
Low | No | 243 | OG0004933 | Get ORF Coding potential... Type: noncoding Potential: -0.553 Folding energies... MFEI: -27.613 AMFE: -0.671 GC content %: 41.152 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Carietinum_Ca_23128 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia |