Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Cbraunii_CBR_g34003 [ CBR_g34003] |
BFEA01000388 | 363572 | 367276 | v1 | Chara braunii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Cbraunii_GBG81822 GBG81822 |
Low | No | 3705 | OG0131852 | Get ORF Coding potential... Type: noncoding Potential: -0.917 Folding energies... MFEI: -32.645 AMFE: -0.676 GC content %: 48.259 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Cbraunii_GBG81822 | RepBase (RepeatMasker) | 2014-01-31 | DNA/CMC-EnSpm; DNA/hAT-Tag1; LTR/Copia; LTR/Gypsy |