Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Cbraunii_CBR_g36854 [ CBR_g36854] |
BFEA01000433 | 759399 | 761163 | v1 | Chara braunii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Cbraunii_GBG83239 GBG83239 |
Low | No | 1765 | OG0131874 | Get ORF Coding potential... Type: coding Potential: 0.054 Folding energies... MFEI: -29.949 AMFE: -0.603 GC content %: 49.632 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Cbraunii_GBG83239 | RepBase (RepeatMasker) | 2014-01-31 | DNA/CMC-EnSpm; DNA/PiggyBac; LTR/Copia; LTR/Gypsy; LTR/Pao; Simple_repeat |