Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Cbraunii_CBR_g37216 [ CBR_g37216] |
BFEA01000441 | 1040818 | 1041326 | v1 | Chara braunii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Cbraunii_GBG83502 GBG83502 |
Low | Yes | 509 | OG0131876 | Get ORF Coding potential... Type: noncoding Potential: -0.602 Folding energies... MFEI: -34.047 AMFE: -0.661 GC content %: 51.473 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Cbraunii_GBG83502 | Rfam | 14.6 | mir-598 | 5.0e-4 |
Cbraunii_GBG83502 | RepBase (RepeatMasker) | 2014-01-31 | DNA/Maverick |