Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccanephora_GSCOC_T00006335001 [ GSCOC_T00006335001] |
2 | 50498374 | 50500176 | v1 | Coffea canephora (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccanephora_CDP17167 CDP17167 |
Low | No | 1648 | OG0142466 | Get ORF Coding potential... Type: noncoding Potential: -0.200 Folding energies... MFEI: -23.004 AMFE: -0.632 GC content %: 36.408 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccanephora_CDP17167 | SwissProt | 2021-04-01 | Q9LRR5 | 2.65e-11 |