Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccanephora_GSCOC_T00024199001 [ GSCOC_T00024199001] |
1 | 29511937 | 29513396 | v1 | Coffea canephora (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccanephora_CDP07085 CDP07085 |
Low | No | 358 | OG0141787 | Get ORF Coding potential... Type: noncoding Potential: -0.286 Folding energies... MFEI: -27.989 AMFE: -0.573 GC content %: 48.883 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccanephora_CDP07085 | SwissProt | 2021-04-01 | Q9FY84 | 2.28e-12 |