Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccapsularis_CCACVL1_15899 [ CCACVL1_15899] |
contig10922 | 12947 | 13366 | v1 | Corchorus capsularis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccapsularis_OMO76103 OMO76103 |
Low | No | 345 | OG0143934 | Get ORF Coding potential... Type: noncoding Potential: -0.699 Folding energies... MFEI: -23.681 AMFE: -0.501 GC content %: 47.246 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccapsularis_OMO76103 | SwissProt | 2021-04-01 | Q43194 | 1.41e-4 |